3D structure

PDB id
8ETI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Fkbp39 associated 60S nascent ribosome State 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
UGGUAUUUG*CGGAGCUA
Length
17 nucleotides
Bulged bases
8ETI|1|1|U|3152, 8ETI|1|1|U|3154
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8ETI|1|1|U|3147
8ETI|1|1|G|3148
8ETI|1|1|G|3149
8ETI|1|1|U|3150
8ETI|1|1|A|3151
8ETI|1|1|U|3152
8ETI|1|1|U|3153
8ETI|1|1|U|3154
8ETI|1|1|G|3155
*
8ETI|1|1|C|3180
8ETI|1|1|G|3181
8ETI|1|1|G|3182
8ETI|1|1|A|3183
8ETI|1|1|G|3184
8ETI|1|1|C|3185
8ETI|1|1|U|3186
8ETI|1|1|A|3187

Current chains

Chain 1
RNA (1564-MER)

Nearby chains

Chain B
60S ribosomal protein L3-A
Chain V
60S ribosomal protein L23-A
Chain d
60S ribosomal protein L31
Chain u
Ribosome biogenesis protein rlp24

Coloring options:

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