IL_8ETI_061

3D structure

PDB id

8ETI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Fkbp39 associated 60S nascent ribosome State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGAUG*UUG

Length

8 nucleotides

Bulged bases

8ETI|1|1|U|3359

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ETI_061 not in the Motif Atlas

Homologous match to IL_8C3A_133

Geometric discrepancy: 0.4192

The information below is about IL_8C3A_133

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_60154.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

8ETI|1|1|C|3325
8ETI|1|1|G|3326
8ETI|1|1|A|3327
8ETI|1|1|U|3328
8ETI|1|1|G|3329
*
8ETI|1|1|U|3358
8ETI|1|1|U|3359
8ETI|1|1|G|3360

Current chains

Chain 1

RNA (1564-MER)

Nearby chains

Chain E

60S ribosomal protein L6

Chain M

60S ribosomal protein L14