3D structure

PDB id
8ETI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Fkbp39 associated 60S nascent ribosome State 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
CGCAAU*AGAAAGCG
Length
14 nucleotides
Bulged bases
8ETI|1|1|A|3238, 8ETI|1|1|A|3239
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8ETI|1|1|C|3098
8ETI|1|1|G|3099
8ETI|1|1|C|3100
8ETI|1|1|A|3101
8ETI|1|1|A|3102
8ETI|1|1|U|3103
*
8ETI|1|1|A|3235
8ETI|1|1|G|3236
8ETI|1|1|A|3237
8ETI|1|1|A|3238
8ETI|1|1|A|3239
8ETI|1|1|G|3240
8ETI|1|1|C|3241
8ETI|1|1|G|3242

Current chains

Chain 1
RNA (1564-MER)

Nearby chains

Chain 2
5.8S ribosomal RNA; 5.8S rRNA
Chain B
60S ribosomal protein L3-A
Chain O
60S ribosomal protein L16-B

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0878 s