IL_8EVP_019
3D structure
- PDB id
- 8EVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- CAGACAGG*CAUAAUG
- Length
- 15 nucleotides
- Bulged bases
- 8EVP|1|A1|A|438, 8EVP|1|A1|A|440
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8EVP|1|A1|C|435
8EVP|1|A1|A|436
8EVP|1|A1|G|437
8EVP|1|A1|A|438
8EVP|1|A1|C|439
8EVP|1|A1|A|440
8EVP|1|A1|G|494
8EVP|1|A1|G|495
*
8EVP|1|A1|C|618
8EVP|1|A1|A|619
8EVP|1|A1|U|620
8EVP|1|A1|A|621
8EVP|1|A1|A|622
8EVP|1|A1|U|623
8EVP|1|A1|G|624
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AE
- 60S ribosomal protein L6-A
- Chain AP
- 60S ribosomal protein L17-A
- Chain Ae
- RPL32 isoform 1
- Chain Af
- 60S ribosomal protein L33-A
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