IL_8EVP_104
3D structure
- PDB id
- 8EVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- GGAG*CGCCAGUGAAAUAC
- Length
- 18 nucleotides
- Bulged bases
- 8EVP|1|A1|C|2479, 8EVP|1|A1|A|2484, 8EVP|1|A1|A|2485
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8EVP|1|A1|G|2466
8EVP|1|A1|G|2467
8EVP|1|A1|A|2468
8EVP|1|A1|G|2469
*
8EVP|1|A1|C|2476
8EVP|1|A1|G|2477
8EVP|1|A1|C|2478
8EVP|1|A1|C|2479
8EVP|1|A1|A|2480
8EVP|1|A1|G|2481
8EVP|1|A1|U|2482
8EVP|1|A1|G|2483
8EVP|1|A1|A|2484
8EVP|1|A1|A|2485
8EVP|1|A1|A|2486
8EVP|1|A1|U|2487
8EVP|1|A1|A|2488
8EVP|1|A1|C|2489
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain E
- RPL1A isoform 1
- Chain EC
- Internal ribosome entry site
Coloring options: