IL_8EVQ_034
3D structure
- PDB id
- 8EVQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- UGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8EVQ_034 not in the Motif Atlas
- Geometric match to IL_5J7L_263
- Geometric discrepancy: 0.0951
- The information below is about IL_5J7L_263
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_50730.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
8EVQ|1|A1|U|834
8EVQ|1|A1|G|835
8EVQ|1|A1|A|836
8EVQ|1|A1|A|837
8EVQ|1|A1|G|838
*
8EVQ|1|A1|U|855
8EVQ|1|A1|G|856
8EVQ|1|A1|G|857
8EVQ|1|A1|A|858
8EVQ|1|A1|G|859
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AA
- 60S ribosomal protein L2-A
- Chain AR
- 60S ribosomal protein L19-A
- Chain Ap
- 60S ribosomal protein L43-A
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