IL_8EVQ_044
3D structure
- PDB id
- 8EVQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- GAUUA*UUCUC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8EVQ_044 not in the Motif Atlas
- Geometric match to IL_4V88_422
- Geometric discrepancy: 0.3939
- The information below is about IL_4V88_422
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
8EVQ|1|A1|G|1005
8EVQ|1|A1|A|1006
8EVQ|1|A1|U|1007
8EVQ|1|A1|U|1008
8EVQ|1|A1|A|1009
*
8EVQ|1|A1|U|1041
8EVQ|1|A1|U|1042
8EVQ|1|A1|C|1043
8EVQ|1|A1|U|1044
8EVQ|1|A1|C|1045
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AD
- RPL5 isoform 1
- Chain AI
- RPL10 isoform 1
Coloring options: