IL_8EYQ_064

3D structure

PDB id

8EYQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S_delta_ksgA_h44_inactive_conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AAC*GUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: AAC,GUU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8EYQ_064 not in the Motif Atlas

Geometric match to IL_4V88_453

Geometric discrepancy: 0.246

The information below is about IL_4V88_453

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10167.1

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

48

Unit IDs

8EYQ|1|A|A|1507
8EYQ|1|A|A|1508
8EYQ|1|A|C|1509
*
8EYQ|1|A|G|1526
8EYQ|1|A|U|1527
8EYQ|1|A|U|1528

Current chains

Chain A

16S_rRNA

Nearby chains

Chain K

30S ribosomal protein S11