IL_8FKR_074
3D structure
- PDB id
- 8FKR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nucleolar pre-60S ribosomal subunit (State B1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- AUUAU*AGAAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FKR_074 not in the Motif Atlas
- Geometric match to IL_6CZR_145
- Geometric discrepancy: 0.2973
- The information below is about IL_6CZR_145
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
8FKR|1|L3|A|4681
8FKR|1|L3|U|4682
8FKR|1|L3|U|4683
8FKR|1|L3|A|4684
8FKR|1|L3|U|4685
*
8FKR|1|L3|A|4705
8FKR|1|L3|G|4706
8FKR|1|L3|A|4707
8FKR|1|L3|A|4708
8FKR|1|L3|U|4709
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L7
- 60S ribosomal protein L13a
- Chain NF
- Ribosome biogenesis protein NSA2 homolog
- Chain SG
- 60S ribosomal protein L9
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