IL_8FKS_013
3D structure
- PDB id
- 8FKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nucleolar pre-60S ribosomal subunit (State B2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- CUCAGUAA*UGAACAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FKS_013 not in the Motif Atlas
- Homologous match to IL_8C3A_006
- Geometric discrepancy: 0.1343
- The information below is about IL_8C3A_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_88613.1
- Basepair signature
- cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
8FKS|1|L3|C|81
8FKS|1|L3|U|82
8FKS|1|L3|C|83
8FKS|1|L3|A|84
8FKS|1|L3|G|85
8FKS|1|L3|U|86
8FKS|1|L3|A|87
8FKS|1|L3|A|88
*
8FKS|1|L3|U|96
8FKS|1|L3|G|97
8FKS|1|L3|A|98
8FKS|1|L3|A|99
8FKS|1|L3|C|100
8FKS|1|L3|A|101
8FKS|1|L3|G|102
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L6
- 60S ribosomal protein L13
- Chain L9
- 60S ribosomal protein L15
- Chain SO
- Ribosome biogenesis protein BRX1 homolog
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