IL_8FKX_026

3D structure

PDB id

8FKX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State E)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8FKX|1|L3|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKX|1|L3|A|466
8FKX|1|L3|U|467
8FKX|1|L3|U|468
8FKX|1|L3|C|469
8FKX|1|L3|A|470
8FKX|1|L3|A|471
8FKX|1|L3|C|472
*
8FKX|1|L3|G|682
8FKX|1|L3|C|683
8FKX|1|L3|G|684
8FKX|1|L3|C|685
8FKX|1|L3|A|686
8FKX|1|L3|U|687
8FKX|1|L3|U|688
8FKX|1|L3|U|689

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LL

60S ribosomal protein L28

Chain SC

60S ribosomal protein L6