IL_8FKY_105
3D structure
- PDB id
- 8FKY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nucleolar pre-60S ribosomal subunit (State F)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- AUUAU*AGAAU
- Length
- 10 nucleotides
- Bulged bases
- 8FKY|1|L3|A|4708
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FKY_105 not in the Motif Atlas
- Homologous match to IL_8C3A_129
- Geometric discrepancy: 0.1123
- The information below is about IL_8C3A_129
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
8FKY|1|L3|A|4681
8FKY|1|L3|U|4682
8FKY|1|L3|U|4683
8FKY|1|L3|A|4684
8FKY|1|L3|U|4685
*
8FKY|1|L3|A|4705
8FKY|1|L3|G|4706
8FKY|1|L3|A|4707
8FKY|1|L3|A|4708
8FKY|1|L3|U|4709
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L7
- 60S ribosomal protein L13a
- Chain NB
- Guanine nucleotide-binding protein-like 3
- Chain NF
- Ribosome biogenesis protein NSA2 homolog
- Chain NK
- Protein LLP homolog
- Chain SG
- 60S ribosomal protein L9
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