IL_8FKZ_064
3D structure
- PDB id
- 8FKZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nucleolar pre-60S ribosomal subunit (State G)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- UUAAG*CCAUA
- Length
- 10 nucleotides
- Bulged bases
- 8FKZ|1|L3|U|2070
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FKZ_064 not in the Motif Atlas
- Homologous match to IL_8C3A_051
- Geometric discrepancy: 0.1132
- The information below is about IL_8C3A_051
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
8FKZ|1|L3|U|1905
8FKZ|1|L3|U|1906
8FKZ|1|L3|A|1907
8FKZ|1|L3|A|1908
8FKZ|1|L3|G|1909
*
8FKZ|1|L3|C|2067
8FKZ|1|L3|C|2068
8FKZ|1|L3|A|2069
8FKZ|1|L3|U|2070
8FKZ|1|L3|A|2071
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L18
- Chain LQ
- 60S ribosomal protein L32
- Chain LT
- 60S ribosomal protein L35a
- Chain SD
- 60S ribosomal protein L7
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