IL_8FL0_087
3D structure
- PDB id
- 8FL0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nucleolar pre-60S ribosomal subunit (State H)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.91 Å
Loop
- Sequence
- GUACA*UGUCC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL0_087 not in the Motif Atlas
- Geometric match to IL_8D29_010
- Geometric discrepancy: 0.3131
- The information below is about IL_8D29_010
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
8FL0|1|L3|G|4201
8FL0|1|L3|U|4202
8FL0|1|L3|A|4203
8FL0|1|L3|C|4204
8FL0|1|L3|A|4205
*
8FL0|1|L3|U|4227
8FL0|1|L3|G|4228
8FL0|1|L3|U|4229
8FL0|1|L3|C|4230
8FL0|1|L3|C|4231
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L5
- 60S ribosomal protein L11
- Chain LE
- 60S ribosomal protein L21
- Chain ST
- Ribosome biogenesis regulatory protein homolog
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