IL_8FL2_003
3D structure
- PDB id
- 8FL2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State I1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- CG*CCGG
- Length
- 6 nucleotides
- Bulged bases
- 8FL2|1|L3|C|340
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL2_003 not in the Motif Atlas
- Geometric match to IL_7RQB_073
- Geometric discrepancy: 0.2339
- The information below is about IL_7RQB_073
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_88739.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
8FL2|1|L1|C|32
8FL2|1|L1|G|33
*
8FL2|1|L3|C|339
8FL2|1|L3|C|340
8FL2|1|L3|G|341
8FL2|1|L3|G|342
Current chains
- Chain L1
- 5.8S rRNA
- Chain L3
- 28S rRNA
Nearby chains
- Chain L6
- 60S ribosomal protein L13
- Chain L9
- 60S ribosomal protein L15
- Chain LW
- 60S ribosomal protein L37
- Chain SA
- 60S ribosomal protein L4
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