IL_8FL3_142

3D structure

PDB id

8FL3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

G(OMC)(PSU)C*G(PSU)G(A2M)GC

Length

10 nucleotides

Bulged bases

8FL3|1|L3|G|4522

QA status

Modified nucleotides: OMC, PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL3|1|L3|G|4455
8FL3|1|L3|OMC|4456
8FL3|1|L3|PSU|4457
8FL3|1|L3|C|4458
*
8FL3|1|L3|G|4520
8FL3|1|L3|PSU|4521
8FL3|1|L3|G|4522
8FL3|1|L3|A2M|4523
8FL3|1|L3|G|4524
8FL3|1|L3|C|4525

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LG

60S ribosomal protein L23

Chain LN

60S ribosomal protein L3

Chain SR

GTP-binding protein 4