IL_8FL3_146
3D structure
- PDB id
- 8FL3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State I2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.53 Å
Loop
- Sequence
- G(PSU)G*CAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL3_146 not in the Motif Atlas
- Geometric match to IL_5TBW_047
- Geometric discrepancy: 0.2697
- The information below is about IL_5TBW_047
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
8FL3|1|L3|G|4470
8FL3|1|L3|PSU|4471
8FL3|1|L3|G|4472
*
8FL3|1|L3|C|4483
8FL3|1|L3|A|4484
8FL3|1|L3|C|4485
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain NB
- Guanine nucleotide-binding protein-like 3
- Chain NF
- Ribosome biogenesis protein NSA2 homolog
- Chain NK
- Protein LLP homolog
- Chain SG
- 60S ribosomal protein L9
- Chain SR
- GTP-binding protein 4
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