IL_8FL4_098
3D structure
- PDB id
- 8FL4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State I3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- AGUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 8FL4|1|L3|G|3839
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL4_098 not in the Motif Atlas
- Geometric match to IL_5TBW_077
- Geometric discrepancy: 0.1628
- The information below is about IL_5TBW_077
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_06455.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
8FL4|1|L3|A|2850
8FL4|1|L3|G|2851
8FL4|1|L3|U|2852
8FL4|1|L3|C|2853
8FL4|1|L3|G|2854
8FL4|1|L3|G|2855
*
8FL4|1|L3|C|3837
8FL4|1|L3|U|3838
8FL4|1|L3|G|3839
8FL4|1|L3|U|3840
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LG
- 60S ribosomal protein L23
- Chain LN
- 60S ribosomal protein L3
- Chain NC
- Nucleolar GTP-binding protein 2
- Chain NP
- Zinc finger protein 593
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