IL_8FL4_099
3D structure
- PDB id
- 8FL4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State I3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- CGUAAC*GGAUAAG
- Length
- 13 nucleotides
- Bulged bases
- 8FL4|1|L3|U|2880
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL4_099 not in the Motif Atlas
- Geometric match to IL_4V9F_063
- Geometric discrepancy: 0.0945
- The information below is about IL_4V9F_063
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_20700.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 10
Unit IDs
8FL4|1|L3|C|2867
8FL4|1|L3|G|2868
8FL4|1|L3|U|2869
8FL4|1|L3|A|2870
8FL4|1|L3|A|2871
8FL4|1|L3|C|2872
*
8FL4|1|L3|G|2877
8FL4|1|L3|G|2878
8FL4|1|L3|A|2879
8FL4|1|L3|U|2880
8FL4|1|L3|A|2881
8FL4|1|L3|A|2882
8FL4|1|L3|G|2883
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LX
- 60S ribosomal protein L37a
- Chain NC
- Nucleolar GTP-binding protein 2
- Chain NP
- Zinc finger protein 593
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