IL_8FL6_024
3D structure
- PDB id
- 8FL6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State J1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- GGUC*GCUAC
- Length
- 9 nucleotides
- Bulged bases
- 8FL6|1|L3|C|1301
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL6_024 not in the Motif Atlas
- Geometric match to IL_7MLW_007
- Geometric discrepancy: 0.3299
- The information below is about IL_7MLW_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49140.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
8FL6|1|L3|G|443
8FL6|1|L3|G|444
8FL6|1|L3|U|445
8FL6|1|L3|C|446
*
8FL6|1|L3|G|1300
8FL6|1|L3|C|1301
8FL6|1|L3|U|1302
8FL6|1|L3|A|1303
8FL6|1|L3|C|1304
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L1
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LQ
- 60S ribosomal protein L32
- Chain LT
- 60S ribosomal protein L35a
Coloring options: