3D structure

PDB id
8FL9 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human nuclear pre-60S ribosomal subunit (State J3)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.75 Å

Loop

Sequence
GCUCC*GCCC
Length
9 nucleotides
Bulged bases
8FL9|1|L3|U|171
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8FL9|1|L3|G|169
8FL9|1|L3|C|170
8FL9|1|L3|U|171
8FL9|1|L3|C|172
8FL9|1|L3|C|173
*
8FL9|1|L3|G|263
8FL9|1|L3|C|264
8FL9|1|L3|C|265
8FL9|1|L3|C|266

Current chains

Chain L3
28S rRNA

Nearby chains

Chain L6
60S ribosomal protein L13
Chain LS
60S ribosomal protein L35

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.3056 s