IL_8FL9_047
3D structure
- PDB id
- 8FL9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State J3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL9_047 not in the Motif Atlas
- Geometric match to IL_7RQB_089
- Geometric discrepancy: 0.1437
- The information below is about IL_7RQB_089
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.10
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 33
Unit IDs
8FL9|1|L3|C|1431
8FL9|1|L3|G|1432
8FL9|1|L3|A|1433
8FL9|1|L3|G|1434
*
8FL9|1|L3|C|1450
8FL9|1|L3|G|1451
8FL9|1|L3|A|1452
8FL9|1|L3|G|1453
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L18
- Chain LM
- 60S ribosomal protein L29
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