IL_8FL9_084
3D structure
- PDB id
- 8FL9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State J3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GAGUGG*CGC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL9_084 not in the Motif Atlas
- Geometric match to IL_6DME_003
- Geometric discrepancy: 0.3353
- The information below is about IL_6DME_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75527.1
- Basepair signature
- cWW-cWW-cSH-cWW
- Number of instances in this motif group
- 10
Unit IDs
8FL9|1|L3|G|2542
8FL9|1|L3|A|2543
8FL9|1|L3|G|2544
8FL9|1|L3|U|2545
8FL9|1|L3|G|2546
8FL9|1|L3|G|2547
*
8FL9|1|L3|C|2772
8FL9|1|L3|G|2773
8FL9|1|L3|C|2774
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L1
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LY
- 60S ribosomal protein L38
Coloring options: