IL_8FL9_115
3D structure
- PDB id
- 8FL9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State J3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GA*UACC
- Length
- 6 nucleotides
- Bulged bases
- 8FL9|1|L3|C|4560
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL9_115 not in the Motif Atlas
- Geometric match to IL_4WF9_078
- Geometric discrepancy: 0.2505
- The information below is about IL_4WF9_078
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48076.7
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 40
Unit IDs
8FL9|1|L3|G|3900
8FL9|1|L3|A|3901
*
8FL9|1|L3|U|4558
8FL9|1|L3|A|4559
8FL9|1|L3|C|4560
8FL9|1|L3|C|4561
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LA
- 60S ribosomal protein L17
- Chain LN
- 60S ribosomal protein L3
Coloring options: