IL_8FL9_125
3D structure
- PDB id
- 8FL9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State J3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GA(PSU)C*GAC
- Length
- 7 nucleotides
- Bulged bases
- 8FL9|1|L3|A|4292
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL9_125 not in the Motif Atlas
- Geometric match to IL_2O3X_003
- Geometric discrepancy: 0.1999
- The information below is about IL_2O3X_003
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_61702.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
8FL9|1|L3|G|4291
8FL9|1|L3|A|4292
8FL9|1|L3|PSU|4293
8FL9|1|L3|C|4294
*
8FL9|1|L3|G|4316
8FL9|1|L3|A|4317
8FL9|1|L3|C|4318
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein L21
- Chain LM
- 60S ribosomal protein L29
- Chain LV
- 60S ribosomal protein L36a
Coloring options: