IL_8FL9_182
3D structure
- PDB id
- 8FL9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State J3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GA(PSU)*AC
- Length
- 5 nucleotides
- Bulged bases
- 8FL9|1|L3|A|4292
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL9_182 not in the Motif Atlas
- Geometric match to IL_7A0S_064
- Geometric discrepancy: 0.3483
- The information below is about IL_7A0S_064
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 134
Unit IDs
8FL9|1|L3|G|4291
8FL9|1|L3|A|4292
8FL9|1|L3|PSU|4293
*
8FL9|1|L3|A|4317
8FL9|1|L3|C|4318
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LM
- 60S ribosomal protein L29
- Chain LV
- 60S ribosomal protein L36a
Coloring options: