IL_8FLA_033

3D structure

PDB id

8FLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

GAUC*GAC

Length

7 nucleotides

Bulged bases

8FLA|1|L3|A|509

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FLA_033 not in the Motif Atlas

Geometric match to IL_4P3U_012

Geometric discrepancy: 0.2274

The information below is about IL_4P3U_012

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

78

Unit IDs

8FLA|1|L3|G|508
8FLA|1|L3|A|509
8FLA|1|L3|U|510
8FLA|1|L3|C|511
*
8FLA|1|L3|G|648
8FLA|1|L3|A|649
8FLA|1|L3|C|650

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L6

60S ribosomal protein L13

Chain LK

60S ribosomal protein L27a