IL_8FLA_101

3D structure

PDB id

8FLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

AGUCGG*CUGU

Length

10 nucleotides

Bulged bases

8FLA|1|L3|G|3839

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FLA_101 not in the Motif Atlas

Homologous match to IL_8C3A_083

Geometric discrepancy: 0.1836

The information below is about IL_8C3A_083

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_06455.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

7

Unit IDs

8FLA|1|L3|A|2850
8FLA|1|L3|G|2851
8FLA|1|L3|U|2852
8FLA|1|L3|C|2853
8FLA|1|L3|G|2854
8FLA|1|L3|G|2855
*
8FLA|1|L3|C|3837
8FLA|1|L3|U|3838
8FLA|1|L3|G|3839
8FLA|1|L3|U|3840

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LG

60S ribosomal protein L23

Chain LN

60S ribosomal protein L3

Chain NP

Zinc finger protein 593