IL_8FLA_102

3D structure

PDB id

8FLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

CGUAAC*GGAUAAG

Length

13 nucleotides

Bulged bases

8FLA|1|L3|U|2880

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FLA_102 not in the Motif Atlas

Homologous match to IL_8C3A_084

Geometric discrepancy: 0.0743

The information below is about IL_8C3A_084

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65969.4

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

8FLA|1|L3|C|2867
8FLA|1|L3|G|2868
8FLA|1|L3|U|2869
8FLA|1|L3|A|2870
8FLA|1|L3|A|2871
8FLA|1|L3|C|2872
*
8FLA|1|L3|G|2877
8FLA|1|L3|G|2878
8FLA|1|L3|A|2879
8FLA|1|L3|U|2880
8FLA|1|L3|A|2881
8FLA|1|L3|A|2882
8FLA|1|L3|G|2883

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LX

60S ribosomal protein L37a

Chain NP

Zinc finger protein 593