3D structure

PDB id
8FLB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human nuclear pre-60S ribosomal subunit (State K2)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.55 Å

Loop

Sequence
CGAAU*ACAUGUG
Length
12 nucleotides
Bulged bases
8FLB|1|L3|G|119, 8FLB|1|L3|U|150
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8FLB|1|L3|C|118
8FLB|1|L3|G|119
8FLB|1|L3|A|120
8FLB|1|L3|A|121
8FLB|1|L3|U|122
*
8FLB|1|L3|A|147
8FLB|1|L3|C|148
8FLB|1|L3|A|149
8FLB|1|L3|U|150
8FLB|1|L3|G|151
8FLB|1|L3|U|152
8FLB|1|L3|G|153

Current chains

Chain L3
28S rRNA

Nearby chains

Chain L1
5.8S ribosomal RNA; 5.8S rRNA
Chain L9
60S ribosomal protein L15
Chain LS
60S ribosomal protein L35
Chain SE
60S ribosomal protein L7a
Chain SM
Pescadillo homolog

Coloring options:

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