IL_8FLC_064
3D structure
- PDB id
- 8FLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State K3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- AC(PSU)U*AACU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FLC_064 not in the Motif Atlas
- Geometric match to IL_1JID_002
- Geometric discrepancy: 0.2634
- The information below is about IL_1JID_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 39
Unit IDs
8FLC|1|L3|A|1858
8FLC|1|L3|C|1859
8FLC|1|L3|PSU|1860
8FLC|1|L3|U|1861
*
8FLC|1|L3|A|1873
8FLC|1|L3|A|1874
8FLC|1|L3|C|1875
8FLC|1|L3|U|1876
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L4
- 5S ribosomal RNA; 5S rRNA
- Chain LE
- 60S ribosomal protein L21
- Chain LM
- 60S ribosomal protein L29
- Chain NR
- Translation machinery-associated protein 16
- Chain SD
- 60S ribosomal protein L7
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