IL_8FLC_127

3D structure

PDB id

8FLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GACC*GC

Length

6 nucleotides

Bulged bases

8FLC|1|L3|C|4349

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FLC_127 not in the Motif Atlas

Geometric match to IL_5J7L_032

Geometric discrepancy: 0.2683

The information below is about IL_5J7L_032

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_26793.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

16

Unit IDs

8FLC|1|L3|G|4347
8FLC|1|L3|A|4348
8FLC|1|L3|C|4349
8FLC|1|L3|C|4350
*
8FLC|1|L3|G|4364
8FLC|1|L3|C|4365

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L6

60S ribosomal protein L13

Chain LB

60S ribosomal protein L18

Chain LK

60S ribosomal protein L27a

Chain LV

60S ribosomal protein L36a