IL_8FLC_184
3D structure
- PDB id
- 8FLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State K3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- U(PSU)GA*(PSU)ACA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FLC_184 not in the Motif Atlas
- Homologous match to IL_8C3A_109
- Geometric discrepancy: 0.3414
- The information below is about IL_8C3A_109
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
8FLC|1|L3|U|4295
8FLC|1|L3|PSU|4296
8FLC|1|L3|G|4297
8FLC|1|L3|A|4298
*
8FLC|1|L3|PSU|4312
8FLC|1|L3|A|4313
8FLC|1|L3|C|4314
8FLC|1|L3|A|4315
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L18
- Chain LE
- 60S ribosomal protein L21
- Chain LM
- 60S ribosomal protein L29
- Chain LV
- 60S ribosomal protein L36a
- Chain SB
- 60S ribosomal protein L5
Coloring options: