IL_8FLD_007
3D structure
- PDB id
- 8FLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State L1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.58 Å
Loop
- Sequence
- GCG*CC
- Length
- 5 nucleotides
- Bulged bases
- 8FLD|1|L1|C|150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FLD_007 not in the Motif Atlas
- Homologous match to IL_5TBW_002
- Geometric discrepancy: 0.2372
- The information below is about IL_5TBW_002
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.13
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 40
Unit IDs
8FLD|1|L1|G|149
8FLD|1|L1|C|150
8FLD|1|L1|G|151
*
8FLD|1|L3|C|6
8FLD|1|L3|C|7
Current chains
- Chain L1
- 5.8S rRNA
- Chain L3
- 28S rRNA
Nearby chains
- Chain L9
- 60S ribosomal protein L15
- Chain LH
- 60S ribosomal protein L23a
- Chain NL
- Ribosome biogenesis protein NOP53
- Chain SE
- 60S ribosomal protein L7a
- Chain SM
- Pescadillo homolog
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