IL_8FLD_096
3D structure
- PDB id
- 8FLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State L1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.58 Å
Loop
- Sequence
- UGGAAUG*CGAGAGA
- Length
- 14 nucleotides
- Bulged bases
- 8FLD|1|L3|U|2661, 8FLD|1|L3|A|2674
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FLD_096 not in the Motif Atlas
- Homologous match to IL_8C3A_079
- Geometric discrepancy: 0.1212
- The information below is about IL_8C3A_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60192.2
- Basepair signature
- cWW-tSH-tSH-tSS-tHS-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
8FLD|1|L3|U|2656
8FLD|1|L3|G|2657
8FLD|1|L3|G|2658
8FLD|1|L3|A|2659
8FLD|1|L3|A|2660
8FLD|1|L3|U|2661
8FLD|1|L3|G|2662
*
8FLD|1|L3|C|2672
8FLD|1|L3|G|2673
8FLD|1|L3|A|2674
8FLD|1|L3|G|2675
8FLD|1|L3|A|2676
8FLD|1|L3|G|2677
8FLD|1|L3|A|2678
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LD
- 60S ribosomal protein L19
- Chain LJ
- 60S ribosomal protein L27
- Chain LO
- 60S ribosomal protein L30
- Chain LR
- 60S ribosomal protein L34
- Chain LX
- 60S ribosomal protein L37a
- Chain NL
- Ribosome biogenesis protein NOP53
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