IL_8FLE_057
3D structure
- PDB id
- 8FLE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State L2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- G(OMG)G*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 8FLE|1|L3|A|1637, 8FLE|1|L3|A|1638
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FLE_057 not in the Motif Atlas
- Homologous match to IL_8C3A_036
- Geometric discrepancy: 0.0701
- The information below is about IL_8C3A_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8FLE|1|L3|G|1624
8FLE|1|L3|OMG|1625
8FLE|1|L3|G|1626
*
8FLE|1|L3|U|1636
8FLE|1|L3|A|1637
8FLE|1|L3|A|1638
8FLE|1|L3|U|1639
8FLE|1|L3|C|1640
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L9
- 60S ribosomal protein L15
- Chain LA
- 60S ribosomal protein L17
- Chain LW
- 60S ribosomal protein L37
- Chain SF
- 60S ribosomal protein L8
- Chain SR
- GTP-binding protein 4
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