IL_8FLF_026

3D structure

PDB id

8FLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CGUG*CCG

Length

7 nucleotides

Bulged bases

8FLF|1|L3|U|492

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FLF_026 not in the Motif Atlas

Geometric match to IL_6IA2_005

Geometric discrepancy: 0.1482

The information below is about IL_6IA2_005

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

8FLF|1|L3|C|490
8FLF|1|L3|G|491
8FLF|1|L3|U|492
8FLF|1|L3|G|493
*
8FLF|1|L3|C|661
8FLF|1|L3|C|662
8FLF|1|L3|G|663

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L18

Chain SA

60S ribosomal protein L4