IL_8FOM_198
3D structure
- PDB id
- 8FOM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.58 Å
Loop
- Sequence
- UGAAAGAC*GGGGAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FOM_198 not in the Motif Atlas
- Homologous match to IL_4LFB_026
- Geometric discrepancy: 0.2702
- The information below is about IL_4LFB_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04211.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8FOM|1|XA|U|605
8FOM|1|XA|G|606
8FOM|1|XA|A|607
8FOM|1|XA|A|608
8FOM|1|XA|A|609
8FOM|1|XA|G|610
8FOM|1|XA|A|611
8FOM|1|XA|C|612
*
8FOM|1|XA|G|628
8FOM|1|XA|G|629
8FOM|1|XA|G|630
8FOM|1|XA|G|631
8FOM|1|XA|A|632
8FOM|1|XA|G|633
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XD
- 30S ribosomal protein S4
- Chain XH
- 30S ribosomal protein S8
- Chain XP
- 30S ribosomal protein S16
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