IL_8FON_075

3D structure

PDB id

8FON (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

CCG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FON_075 not in the Motif Atlas

Geometric match to IL_4WF9_020

Geometric discrepancy: 0.0804

The information below is about IL_4WF9_020

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

174

Unit IDs

8FON|1|RA|C|672
8FON|1|RA|C|673
8FON|1|RA|G|674
*
8FON|1|RA|C|806
8FON|1|RA|U|807
8FON|1|RA|G|808

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RF

50S ribosomal protein L4

Chain RP

50S ribosomal protein L15