IL_8FON_111

3D structure

PDB id

8FON (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FON_111 not in the Motif Atlas

Homologous match to IL_7RQB_055

Geometric discrepancy: 0.1427

The information below is about IL_7RQB_055

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

8FON|1|RA|C|1417
8FON|1|RA|G|1418
8FON|1|RA|A|1419
8FON|1|RA|U|1420
8FON|1|RA|G|1421
*
8FON|1|RA|C|1577
8FON|1|RA|U|1578
8FON|1|RA|A|1579
8FON|1|RA|A|1580
8FON|1|RA|G|1581

Current chains

Chain RA

23S rRNA

Nearby chains