IL_8FON_166

3D structure

PDB id

8FON (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FON_166 not in the Motif Atlas

Homologous match to IL_7RQB_110

Geometric discrepancy: 0.1446

The information below is about IL_7RQB_110

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_83162.5

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

8FON|1|RA|U|2847
8FON|1|RA|G|2848
8FON|1|RA|U|2849
8FON|1|RA|A|2850
8FON|1|RA|A|2851
8FON|1|RA|G|2852
*
8FON|1|RA|U|2865
8FON|1|RA|U|2866
8FON|1|RA|G|2867
8FON|1|RA|A|2868
8FON|1|RA|G|2869

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RR

50S ribosomal protein L17

Chain RT

50S ribosomal protein L19