IL_8FON_226

3D structure

PDB id

8FON (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

8FON|1|XA|C|1400, 8FON|1|XA|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FON_226 not in the Motif Atlas

Homologous match to IL_4LFB_056

Geometric discrepancy: 0.1023

The information below is about IL_4LFB_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_18228.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

8FON|1|XA|C|1399
8FON|1|XA|C|1400
8FON|1|XA|G|1401
*
8FON|1|XA|C|1501
8FON|1|XA|A|1502
8FON|1|XA|A|1503
8FON|1|XA|G|1504

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XV

Transfer RNA; tRNA

Chain XX

mRNA