IL_8FON_246

3D structure

PDB id

8FON (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

CGAAU*AUAG

Length

9 nucleotides

Bulged bases

8FON|1|YA|A|283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FON_246 not in the Motif Atlas

Homologous match to IL_7RQB_011

Geometric discrepancy: 0.0982

The information below is about IL_7RQB_011

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

8FON|1|YA|C|280
8FON|1|YA|G|281
8FON|1|YA|A|282
8FON|1|YA|A|283
8FON|1|YA|U|284
*
8FON|1|YA|A|357
8FON|1|YA|U|358
8FON|1|YA|A|359
8FON|1|YA|G|360

Current chains

Chain YA

23S rRNA

Nearby chains