IL_8FON_297

3D structure

PDB id

8FON (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

GGAAG*UGACAAC

Length

12 nucleotides

Bulged bases

8FON|1|YA|C|1544

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FON_297 not in the Motif Atlas

Homologous match to IL_7RQB_063

Geometric discrepancy: 0.2278

The information below is about IL_7RQB_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02656.1

Basepair signature

cWW-L-R-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

8FON|1|YA|G|1526
8FON|1|YA|G|1527
8FON|1|YA|A|1528
8FON|1|YA|A|1529
8FON|1|YA|G|1530
*
8FON|1|YA|U|1541
8FON|1|YA|G|1542
8FON|1|YA|A|1543
8FON|1|YA|C|1544
8FON|1|YA|A|1545
8FON|1|YA|A|1545|||A
8FON|1|YA|C|1546

Current chains

Chain YA

23S rRNA

Nearby chains