IL_8FON_304
3D structure
- PDB id
- 8FON (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.64 Å
Loop
- Sequence
- UGCGAAC*GGAGGUAUA
- Length
- 16 nucleotides
- Bulged bases
- 8FON|1|YA|G|1801, 8FON|1|YA|G|1816, 8FON|1|YA|U|1820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FON_304 not in the Motif Atlas
- Homologous match to IL_7A0S_065
- Geometric discrepancy: 0.1015
- The information below is about IL_7A0S_065
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_17069.6
- Basepair signature
- cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW
- Number of instances in this motif group
- 5
Unit IDs
8FON|1|YA|U|1798
8FON|1|YA|G|1799
8FON|1|YA|C|1800
8FON|1|YA|G|1801
8FON|1|YA|A|1802
8FON|1|YA|A|1803
8FON|1|YA|C|1804
*
8FON|1|YA|G|1813
8FON|1|YA|G|1814
8FON|1|YA|A|1815
8FON|1|YA|G|1816
8FON|1|YA|G|1817
8FON|1|YA|U|1818
8FON|1|YA|A|1819
8FON|1|YA|U|1820
8FON|1|YA|A|1821
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain XA
- Small subunit ribosomal RNA; SSU rRNA
- Chain YD
- 50S ribosomal protein L2
Coloring options: