IL_8FR8_037
3D structure
- PDB id
- 8FR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 8FR8|1|A|A|1275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FR8_037 not in the Motif Atlas
- Homologous match to IL_4WF9_036
- Geometric discrepancy: 0.0871
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 25
Unit IDs
8FR8|1|A|C|1116
8FR8|1|A|U|1117
8FR8|1|A|A|1118
8FR8|1|A|A|1119
8FR8|1|A|G|1120
*
8FR8|1|A|C|1272
8FR8|1|A|G|1273
8FR8|1|A|A|1274
8FR8|1|A|A|1275
8FR8|1|A|G|1276
Current chains
- Chain A
- 23S rRNA (3119-MER)
Nearby chains
- Chain 3
- 50S ribosomal protein eL31
- Chain 7
- 50S ribosomal protein L30
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain W
- 50S ribosomal protein L20
- Chain X
- 50S ribosomal protein L21
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