IL_8FR8_045
3D structure
- PDB id
- 8FR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GUUG*CACC
- Length
- 8 nucleotides
- Bulged bases
- 8FR8|1|A|U|1179
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FR8_045 not in the Motif Atlas
- Homologous match to IL_5J7L_285
- Geometric discrepancy: 0.3728
- The information below is about IL_5J7L_285
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_92446.2
- Basepair signature
- cWW-cWW-R-L-L
- Number of instances in this motif group
- 5
Unit IDs
8FR8|1|A|G|1177
8FR8|1|A|U|1178
8FR8|1|A|U|1179
8FR8|1|A|G|1180
*
8FR8|1|A|C|1194
8FR8|1|A|A|1195
8FR8|1|A|C|1196
8FR8|1|A|C|1197
Current chains
- Chain A
- 23S rRNA (3119-MER)
Nearby chains
- Chain 2
- 50S ribosomal protein L25
- Chain I
- GTP pyrophosphokinase RelA
- Chain R
- 50S ribosomal protein L10
- Chain S
- 50S ribosomal protein L11
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