IL_8FR8_164
3D structure
- PDB id
- 8FR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- CAGGG*UGGG
- Length
- 9 nucleotides
- Bulged bases
- 8FR8|1|a|G|645
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FR8_164 not in the Motif Atlas
- Homologous match to IL_5J7L_033
- Geometric discrepancy: 0.0844
- The information below is about IL_5J7L_033
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
8FR8|1|a|C|642
8FR8|1|a|A|643
8FR8|1|a|G|644
8FR8|1|a|G|645
8FR8|1|a|G|646
*
8FR8|1|a|U|720
8FR8|1|a|G|721
8FR8|1|a|G|722
8FR8|1|a|G|723
Current chains
- Chain a
- 16S rRNA (1511-MER)
Nearby chains
- Chain g
- 30S ribosomal protein S6
- Chain o
- 30S ribosomal protein S18 1
- Chain p
- 30S ribosomal protein S15
Coloring options: