IL_8FR8_181
3D structure
- PDB id
- 8FR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GUUGC*GGACUC
- Length
- 11 nucleotides
- Bulged bases
- 8FR8|1|a|U|1106
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FR8_181 not in the Motif Atlas
- Homologous match to IL_5J7L_051
- Geometric discrepancy: 0.3039
- The information below is about IL_5J7L_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06691.1
- Basepair signature
- cWW-cWS-L-R-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8FR8|1|a|G|1104
8FR8|1|a|U|1105
8FR8|1|a|U|1106
8FR8|1|a|G|1107
8FR8|1|a|C|1108
*
8FR8|1|a|G|1125
8FR8|1|a|G|1126
8FR8|1|a|A|1127
8FR8|1|a|C|1128
8FR8|1|a|U|1129
8FR8|1|a|C|1130
Current chains
- Chain a
- 16S rRNA (1511-MER)
Nearby chains
- Chain k
- 30S ribosomal protein S9
- Chain l
- 30S ribosomal protein S10
Coloring options: