IL_8FR8_205
3D structure
- PDB id
- 8FR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GGAAU*GGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FR8_205 not in the Motif Atlas
- Homologous match to IL_5J7L_361
- Geometric discrepancy: 0.0888
- The information below is about IL_5J7L_361
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
8FR8|1|a|G|653
8FR8|1|a|G|654
8FR8|1|a|A|655
8FR8|1|a|A|656
8FR8|1|a|U|657
*
8FR8|1|a|G|693
8FR8|1|a|G|694
8FR8|1|a|A|695
8FR8|1|a|A|696
8FR8|1|a|C|697
Current chains
- Chain a
- 16S rRNA (1511-MER)
Nearby chains
- Chain K
- 50S ribosomal protein L2
- Chain g
- 30S ribosomal protein S6
- Chain m
- 30S ribosomal protein S11
- Chain o
- 30S ribosomal protein S18 1
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